CDS

Accession Number TCMCG057C00237
gbkey CDS
Protein Id XP_018470245.1
Location complement(join(1167709..1167854,1167951..1168094,1168201..1168504,1168682..1168861,1168951..1169030,1169103..1169228,1169339..1169390,1170131..1170213,1170344..1170506))
Gene LOC108841955
GeneID 108841955
Organism Raphanus sativus

Protein

Length 425aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018614743.1
Definition PREDICTED: RNA-binding protein BRN2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description CUGBP Elav-like family member
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13207        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009648        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048573        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGAGGAGACGAAGGAGAACGAAGAAGAGAGGGTGAAGCTGTTCGTCGGACAAGTTCCGAAGCACATGACGGAGGACCAGCTCCTCCCATTGTTCCAGGAGTTCTCCATCGTACACGAAGTCAACATCATTAAGGACAAGATAACGCGAGCTTCCCGAGGATGTTGCTTTGTGATATGTCATTCAAGAGAAGAAGCAGACAAAGTGGTCAATGGTTGCCATAACAAGAAGACATTGCCTGGGGCTTCTAGTCCGTTGCAAGTTAAGTATGCAGATGGCGAGGTTGAAAGACTAGAGCACAAACTTTTCGTTGGTATGCTTCCAAAGAATGTCACTGAAGCTGAAGTCTCATCCTTATTCTCCAAATATGGAACCATAAAGGATGTGCAGATTCTAAGAGGGTCTCTACAAACTAGCAAAGGCTGTGTCTTTCTGAAATATGAGTCTAAAGAACAAGCTGTCGCTGCTATGGAGGCCATTAACGGAAAACATATAGTGGAGGGTTCGAATGTTCCTTTGGTTGTCAAATGGGCAGACACAGAAAGGGAAAGACAAGCCCGAAGACTTCAGAAAGCTCAATCTCATGCCTCCAGACTCGCTAACTCTGACCCACAGTATCCTTCTGTGTTTCGAGCCTTACCAATGAGTTATGTTCCTCCTTATAATAGATATGGCTATCATGCACCTGGAAATTATGGGTACATGCTACCACCTATCCAGACTCAACCTGCATTTAACAGTATGGTTTCACCGAACCATGGTGCCAATAATGCATCGCAAGGAGCCACTTTGACCGAGTCTGTTCCACCGCGTTTAGCCGCCCGTAGAAACTTCCATATGCCTCTAGGAAACTATAGTTATCATGGTCTTCAGTATCCAATGGCGTTTCCTAGAGGGATGATCAGTTCTCGCCTTCCTCTAACCACGGTTTCACATGGCAGTTCAAACAACGGCGCATCGACACCTAGCTCGCTGCAAACTGAAGGACCGGCAGGTGCAAATCTATTTATCTATAACATACCTCGAGCATTCGGGGATCGAGAACTTGCGGTTGCATTTCAACCGTTTGGTAAGGTTGTAAGCGCCAAGGTTTTTGTAGACAAGGCCACTGGTGTAAGCAAATGTTTTGGATTCATTAGTTATGACTCACAAGAAGCTGCTCAAAACGCTATTAACACGATGAACGGTTACCAATTAAGCGGTAAGAAGTTGAAAGTTGAGGTCAAGAGAGAAAACGGCCAACAACAACAGAGTAACAAACCTGTAAACAGCTGA
Protein:  
MAEETKENEEERVKLFVGQVPKHMTEDQLLPLFQEFSIVHEVNIIKDKITRASRGCCFVICHSREEADKVVNGCHNKKTLPGASSPLQVKYADGEVERLEHKLFVGMLPKNVTEAEVSSLFSKYGTIKDVQILRGSLQTSKGCVFLKYESKEQAVAAMEAINGKHIVEGSNVPLVVKWADTERERQARRLQKAQSHASRLANSDPQYPSVFRALPMSYVPPYNRYGYHAPGNYGYMLPPIQTQPAFNSMVSPNHGANNASQGATLTESVPPRLAARRNFHMPLGNYSYHGLQYPMAFPRGMISSRLPLTTVSHGSSNNGASTPSSLQTEGPAGANLFIYNIPRAFGDRELAVAFQPFGKVVSAKVFVDKATGVSKCFGFISYDSQEAAQNAINTMNGYQLSGKKLKVEVKRENGQQQQSNKPVNS